![]() Revseq reads one or more nucleotide sequences and writes to file the reverse complement (also known as the anti-sense or reverse sense) of each sequence. Reverse and complement a nucleotide sequence Please help by correcting and extending the Wiki pages. RT an antisense sequence in the Finkel-Biskis-Reilly murine sarcoma virus" ĭR Ensembl-Gn ENSG00000149806 Homo_sapiens.ĭR Ensembl-Tr ENST00000279259 Homo_sapiens.ĭR Ensembl-Tr ENST00000434372 Homo_sapiens.ĭR Ensembl-Tr ENST00000525297 Homo_sapiens.ĭR Ensembl-Tr ENST00000526555 Homo_sapiens.ĭR Ensembl-Tr ENST00000527548 Homo_sapiens.ĭR Ensembl-Tr ENST00000529259 Homo_sapiens.ĭR Ensembl-Tr ENST00000529639 Homo_sapiens.ĭR Ensembl-Tr ENST00000531743 Homo_sapiens.The master copies of EMBOSS documentation are available RT "fau cDNA encodes a ubiquitin-like-S30 fusion protein and is expressed as RA Michiels L., Van der Rauwelaert E., Van Hasselt F., Kas K., Merregaert J. Michiels, University of Antwerp, Dept of Biochemistry, OC Eutheria Euarchontoglires Primates Haplorrhini Catarrhini Hominidae OC Eukaryota Metazoa Chordata Craniata Vertebrata Euteleostomi Mammalia ID X65923 SV 1 linear mRNA STD HUM 518 BP. 'tembl:圆5923' is a sequence entry in the example nucleic acid database 'tembl' (nbrf), swissprot (swiss, sw), dasgff and debug.įor further information on sequence formats. Gff (gff3), gff2, embl (em), genbank (gb, refseq), ddbj, refseqp, pir The input format can be specified by using theĬommand-line qualifier -sformat xxx, where 'xxx' is replacedīy the name of the required format. Written by an EMBOSS or third-party application. Installations include srs:embl, srs:uniprot and ensemblĭata can also be read from sequence output in any supported format Major sequence database sources defined as standard in EMBOSS The input is a standard EMBOSS sequence query (also known as a 'USA'). ![]() Revseq reads one or more nucleotide sequences. More information on associated and general qualifiers can be found with -help -verbose Prompt for standard and additional values Read first file from standard input, write first file to standard output "-outseq" associated seqoutall qualifiers Set this to be false if you do not wish to add 'Reversed:' to the sequence description Set this to be false if you do not wish to complement the output sequence Set this to be false if you do not wish to reverse the output sequence Sequence set(s) filename and optional format (output USA) (Gapped) nucleotide sequence(s) filename and optional format, or reference (input USA) version boolean Report version number and exit die boolean Report dying program messages Qualifiers can be found with -help -verbose help boolean Report command line options and exit. verbose boolean Report some/full command line options debug boolean Write debug output to program.dbg options boolean Prompt for standard and additional values filter boolean Read first file from standard input, write stdout boolean Write first file to standard output ossingle2 boolean Separate file for each entry ioffset1 integer Input start position offset iquery1 string Input query fields or ID list squick1 boolean Read id and sequence only snucleotide1 boolean Sequence is nucleotide send1 integer End of each sequence to be used sbegin1 integer Start of each sequence to be used tag boolean Set this to be false if you do not wish complement boolean Set this to be false if you do not wish reverse boolean Set this to be false if you do not wish seqoutall Sequence set(s)įilename and optional format (output USA) Optional format, or reference (input USA) seqall (Gapped) nucleotide sequence(s) filename and ![]() To create the reverse of 'tembl:圆5923' in the file '圆5923.rev': To create the complement of 'tembl:圆5923' in the file '圆5923.rev': To create the reverse complement (reverse sense) of 'tembl:圆5923' in the file '圆5923.rev': It can also output just the reversed sequence or just the complement of the sequence. The master copies of EMBOSS documentation are available
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